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  • Top cofit genes for RR42_RS11095 from Cupriavidus basilensis FW507-4G11

    3-hydroxyacyl-CoA dehydrogenase
    SEED: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
    KEGG: 3-hydroxyacyl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS36125 IclR family transcriptional regulator 0.32 0.75
    2 RR42_RS22490 IclR family transcriptional regulator no 0.74
    3 RR42_RS35920 3-oxoadipate CoA-transferase no 0.74
    4 RR42_RS21255 LysR family transcriptional regulator no 0.73
    5 RR42_RS29970 IclR family transcriptional regulator no 0.69
    6 RR42_RS22495 hypothetical protein no 0.66
    7 RR42_RS29865 hypothetical protein no 0.66
    8 RR42_RS36595 acyl-CoA dehydrogenase no 0.62
    9 RR42_RS21260 isovaleryl-CoA dehydrogenase no 0.62
    10 RR42_RS15155 CoA-transferase 0.73 0.61
    11 RR42_RS05595 acyl-CoA dehydrogenase 0.77 0.60
    12 RR42_RS26840 DNA-binding protein 0.47 0.60
    13 RR42_RS35910 short-chain dehydrogenase no 0.59
    14 RR42_RS05600 acyl-CoA dehydrogenase 0.75 0.58
    15 RR42_RS35925 3-oxoadipate CoA-transferase no 0.56
    16 RR42_RS29410 acetyl-CoA carboxylase no 0.55
    17 RR42_RS24350 malyl-CoA thiolesterase no 0.51
    18 RR42_RS36645 acyl-CoA dehydrogenase no 0.51
    19 RR42_RS24345 membrane protein no 0.50
    20 RR42_RS36635 long-chain fatty acid--CoA ligase no 0.49

    Or look for negative cofitness