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Cofit
Protein
Homologs
Top cofit genes for RR42_RS10610 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
SEED: Ribose operon repressor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS11140
ABC transporter permease
no
0.72
2
RR42
_RS11155
long-chain fatty acid--CoA ligase
no
0.70
3
RR42
_RS11150
branched-chain amino acid ABC transporter substrate-binding protein
no
0.68
4
RR42
_RS11130
mannosyltransferase
no
0.66
5
RR42
_RS00380
GntR family transcriptional regulator
no
0.63
6
RR42
_RS11135
branched-chain amino acid ABC transporter substrate-binding protein
no
0.62
7
RR42
_RS11145
ABC transporter permease
no
0.61
8
RR42
_RS36695
heavy metal resistance protein CzcA
no
0.60
9
RR42
_RS06395
TetR family transcriptional regulator
no
0.57
10
RR42
_RS35445
ArsR family transcriptional regulator
no
0.56
11
RR42
_RS34870
hypothetical protein
no
0.56
12
RR42
_RS07540
ABC transporter permease
no
0.55
13
RR42
_RS20380
histidine kinase
no
0.54
14
RR42
_RS20375
transcriptional regulator
no
0.53
15
RR42
_RS07535
ABC transporter permease
no
0.53
16
RR42
_RS27735
GntR family transcriptional regulator
no
0.52
17
RR42
_RS24265
hypothetical protein
no
0.52
18
RR42
_RS24605
TetR family transcriptional regulator
no
0.50
19
RR42
_RS02330
trehalose-6-phosphate synthase
no
0.50
20
RR42
_RS09100
transcriptional regulator
0.46
0.50
Or look for
negative cofitness