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  • Top cofit genes for RR42_RS10135 from Cupriavidus basilensis FW507-4G11

    biofilm PGA synthesis protein PgaC
    SEED: putative cytochrome P450 hydroxylase
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS10140 8-amino-7-oxononanoate synthase no 0.69
    2 RR42_RS25655 pyruvate carboxylase no 0.60
    3 RR42_RS11255 Fis family transcriptional regulator no 0.46
    4 RR42_RS11270 aconitate hydratase 0.29 0.44
    5 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) no 0.43
    6 RR42_RS11275 3-methylitaconate isomerase no 0.40
    7 RR42_RS02315 threonine dehydratase no 0.39
    8 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.37 0.32
    9 RR42_RS00420 hypothetical protein no 0.31
    10 RR42_RS05845 ATPase AAA no 0.30
    11 RR42_RS01040 cobalamin biosynthesis protein CobW no 0.30
    12 RR42_RS04850 hypothetical protein no 0.29
    13 RR42_RS04580 Butyryl-CoA dehydrogenase (EC 1.3.8.1) (from data) no 0.29
    14 RR42_RS36930 membrane protein 0.24 0.29
    15 RR42_RS08220 hypothetical protein no 0.28
    16 RR42_RS28395 DNA-binding protein no 0.28
    17 RR42_RS29765 flavin reductase no 0.28
    18 RR42_RS00940 biotin synthase 0.37 0.28
    19 RR42_RS31200 3-oxoacyl-ACP synthase no 0.28
    20 RR42_RS00930 8-amino-7-oxononanoate synthase 0.27 0.28

    Or look for negative cofitness