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Cofit
Protein
Homologs
Top cofit genes for RR42_RS09560 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS05430
DNA-directed RNA polymerase sigma-70 factor
no
0.38
2
RR42
_RS06285
DNA mismatch repair protein MutS
no
0.38
3
RR42
_RS20500
hypothetical protein
no
0.38
4
RR42
_RS24905
alpha/beta hydrolase
no
0.38
5
RR42
_RS00760
hypothetical protein
no
0.36
6
RR42
_RS18315
toxin
no
0.36
7
RR42
_RS21220
iron transporter FeoB
no
0.35
8
RR42
_RS36755
hypothetical protein
no
0.35
9
RR42
_RS05980
TetR family transcriptional regulator
no
0.35
10
RR42
_RS25795
(2Fe-2S)-binding protein
no
0.35
11
RR42
_RS05850
cytochrome C
no
0.34
12
RR42
_RS32930
twitching motility protein PilT
no
0.34
13
RR42
_RS01655
AMP-dependent synthetase
no
0.34
14
RR42
_RS09690
fimbrial protein
no
0.33
15
RR42
_RS25470
alpha/beta hydrolase
no
0.33
16
RR42
_RS03790
molybdenum cofactor biosynthesis protein MoaA
no
0.33
17
RR42
_RS27400
membrane protein
no
0.32
18
RR42
_RS29195
short-chain dehydrogenase
no
0.32
19
RR42
_RS12010
ABC transporter
no
0.32
20
RR42
_RS23790
hypothetical protein
no
0.32
Or look for
negative cofitness