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Cofit
Protein
Homologs
Top cofit genes for RR42_RS09555 from
Cupriavidus basilensis FW507-4G11
universal stress protein UspA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS13685
cupin
no
0.43
2
RR42
_RS20010
hypothetical protein
no
0.43
3
RR42
_RS26760
hypothetical protein
no
0.41
4
RR42
_RS09575
hypothetical protein
no
0.40
5
RR42
_RS25115
IclR family transcriptional regulator
no
0.39
6
RR42
_RS30595
hypothetical protein
no
0.39
7
RR42
_RS30465
monovalent cation/H+ antiporter subunit A
no
0.38
8
RR42
_RS22380
hypothetical protein
no
0.36
9
RR42
_RS10865
LysR family transcriptional regulator
no
0.36
10
RR42
_RS27435
aldolase
no
0.36
11
RR42
_RS13055
NAD-dependent protein deacylase
no
0.36
12
RR42
_RS28035
ABC transporter substrate-binding protein
no
0.36
13
RR42
_RS11600
flavin reductase
no
0.35
14
RR42
_RS12675
membrane protein
no
0.35
15
RR42
_RS08585
baseplate assembly protein
no
0.34
16
RR42
_RS29285
hypothetical protein
no
0.34
17
RR42
_RS07500
benzoyl-CoA oxygenase
no
0.34
18
RR42
_RS27065
hypothetical protein
no
0.33
19
RR42
_RS00395
AraC family transcriptional regulator
no
0.33
20
RR42
_RS10690
3-oxoadipate enol-lactonase
no
0.33
Or look for
negative cofitness