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Cofit
Protein
Homologs
Top cofit genes for RR42_RS07225 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS18335
nitrate ABC transporter ATP-binding protein
no
0.37
2
RR42
_RS36575
hypothetical protein
no
0.34
3
RR42
_RS34215
ferredoxin
no
0.33
4
RR42
_RS24115
C4-dicarboxylate ABC transporter permease
no
0.31
5
RR42
_RS34935
cytochrome C oxidase subunit IV
no
0.31
6
RR42
_RS10730
transporter
no
0.31
7
RR42
_RS06875
hypothetical protein
no
0.31
8
RR42
_RS26455
amino acid ABC transporter ATP-binding protein
no
0.31
9
RR42
_RS02550
ABC transporter permease
no
0.30
10
RR42
_RS04135
pilus assembly protein CpaB
no
0.30
11
RR42
_RS16610
hypothetical protein
no
0.29
12
RR42
_RS22375
glyoxalase
no
0.29
13
RR42
_RS16485
sugar ABC transporter substrate-binding protein
no
0.29
14
RR42
_RS13680
IclR family transcriptional regulator
no
0.28
15
RR42
_RS04065
LysR family transcriptional regulator
no
0.28
16
RR42
_RS19835
MFS transporter
no
0.28
17
RR42
_RS02065
phosphate starvation-inducible protein PsiF
no
0.28
18
RR42
_RS28325
3-hydroxyacyl-CoA dehydrogenase
no
0.28
19
RR42
_RS02260
cytochrome C peroxidase
no
0.27
20
RR42
_RS36495
enoyl-CoA hydratase
no
0.27
Or look for
negative cofitness