Top cofit genes for RR42_RS06340 from Cupriavidus basilensis FW507-4G11

peptidyl-prolyl cis-trans isomerase
SEED: Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8)
KEGG: peptidyl-prolyl cis-trans isomerase A (cyclophilin A)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS02320		trehalose phosphatase	0.21	0.35
2	RR42_RS14320		O-succinylhomoserine sulfhydrylase	no	0.35
3	RR42_RS23705		cyclohexanecarboxylate--CoA ligase	no	0.34
4	RR42_RS09920		TetR family transcriptional regulator	no	0.34
5	RR42_RS19005		3-dehydroquinate synthase	0.30	0.33
6	RR42_RS04475		3-phosphoshikimate 1-carboxyvinyltransferase	no	0.33
7	RR42_RS24605		TetR family transcriptional regulator	no	0.33
8	RR42_RS01290		thiamine biosynthesis protein ThiC	no	0.33
9	RR42_RS16270		sulfite reductase	no	0.33
10	RR42_RS16265		required for sulfate utilization, putative electron transport protein for sulfite reductase (from data)	no	0.33
11	RR42_RS29915		MarR family transcriptional regulator	no	0.32
12	RR42_RS06630		integration host factor subunit alpha	no	0.32
13	RR42_RS12980		chemotaxis protein CheY	0.30	0.32
14	RR42_RS18815		cytochrome C	no	0.32
15	RR42_RS06485		chorismate synthase	no	0.32
16	RR42_RS05860		phospho-2-dehydro-3-deoxyheptonate aldolase	0.31	0.32
17	RR42_RS16250		sulfate adenylyltransferase	no	0.32
18	RR42_RS18295		anthranilate synthase component I	0.31	0.31
19	RR42_RS08995		hypothetical protein	no	0.31
20	RR42_RS15865		uracil phosphoribosyltransferase	0.34	0.31

Or look for negative cofitness