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Cofit
Protein
Homologs
Top cofit genes for RR42_RS06015 from
Cupriavidus basilensis FW507-4G11
recombinase
SEED: Site-specific recombinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS21595
IclR family transcriptional regulator
no
0.60
2
RR42
_RS04580
Butyryl-CoA dehydrogenase (EC 1.3.8.1)
(from data)
0.48
0.59
3
RR42
_RS00925
adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
no
0.57
4
RR42
_RS00930
8-amino-7-oxononanoate synthase
0.43
0.57
5
RR42
_RS17305
ion transporter
0.43
0.56
6
RR42
_RS07330
histidine utilization repressor
no
0.54
7
RR42
_RS01565
hypothetical protein
0.38
0.54
8
RR42
_RS00940
biotin synthase
0.50
0.53
9
RR42
_RS29315
AcrR family transcriptional regulator
no
0.49
10
RR42
_RS06010
phosphotyrosine protein phosphatase
no
0.48
11
RR42
_RS00420
hypothetical protein
no
0.48
12
RR42
_RS25545
NADPH:quinone oxidoreductase
no
0.48
13
RR42
_RS18935
metal-dependent hydrolase
0.71
0.46
14
RR42
_RS29255
GTP cyclohydrolase
no
0.46
15
RR42
_RS17010
L-aspartate oxidase
0.60
0.45
16
RR42
_RS34815
diguanylate cyclase
no
0.45
17
RR42
_RS36890
hypothetical protein
no
0.45
18
RR42
_RS01780
glutathione synthetase
no
0.44
19
RR42
_RS18945
toluene tolerance protein
0.34
0.43
20
RR42
_RS11790
phosphoenolpyruvate synthase
no
0.43
Or look for
negative cofitness