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Cofit
Protein
Homologs
Top cofit genes for RR42_RS05895 from
Cupriavidus basilensis FW507-4G11
rhombosortase
SEED: PROBABLE TRANSMEMBRANE PROTEIN
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS31265
hypothetical protein
no
0.36
2
RR42
_RS34885
hypothetical protein
no
0.34
3
RR42
_RS35810
flagellar motor protein MotB
no
0.32
4
RR42
_RS23785
hypothetical protein
no
0.31
5
RR42
_RS09355
membrane protein
no
0.31
6
RR42
_RS20000
lytic transglycosylase
no
0.30
7
RR42
_RS10960
3-hydroxyisobutyrate dehydrogenase
no
0.30
8
RR42
_RS35375
RND transporter
no
0.29
9
RR42
_RS07990
integrase
0.36
0.29
10
RR42
_RS06935
hypothetical protein
no
0.28
11
RR42
_RS16965
ABC transporter
no
0.28
12
RR42
_RS02140
hypothetical protein
no
0.28
13
RR42
_RS16620
hypothetical protein
no
0.28
14
RR42
_RS13335
multidrug transporter MatE
no
0.28
15
RR42
_RS18355
thiol:disulfide interchange protein
no
0.27
16
RR42
_RS29095
XRE family transcriptional regulator
no
0.27
17
RR42
_RS10855
diguanylate phosphodiesterase
no
0.27
18
RR42
_RS35385
hypothetical protein
no
0.27
19
RR42
_RS05890
glutamine-synthetase adenylyltransferase
0.63
0.27
20
RR42
_RS15000
GTP cyclohydrolase
no
0.27
Or look for
negative cofitness