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  • Top cofit genes for RR42_RS05695 from Cupriavidus basilensis FW507-4G11

    pyridoxal-5'-phosphate-dependent protein subunit beta
    SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS15025 membrane protein no 0.44
    2 RR42_RS19785 allantoate amidohydrolase no 0.43
    3 RR42_RS30630 AsnC family transcriptional regulator no 0.42
    4 RR42_RS05250 OHCU decarboxylase no 0.41
    5 RR42_RS19825 LysR family transcriptional regulator no 0.40
    6 RR42_RS05270 5-hydroxyisourate hydrolase no 0.40
    7 RR42_RS05345 LysR family transcriptional regulator no 0.40
    8 RR42_RS05465 2-isopropylmalate synthase no 0.39
    9 RR42_RS20080 L-serine ammonia-lyase (EC 4.3.1.17) (from data) no 0.39
    10 RR42_RS19850 glyoxylate carboligase no 0.39
    11 RR42_RS19540 branched-chain alpha-ketoacid:ferredoxin oxidoreductase, fused (EC 1.2.7.7) (from data) 0.32 0.38
    12 RR42_RS05255 allantoinase no 0.38
    13 RR42_RS19780 peptidase M20 no 0.38
    14 RR42_RS05275 membrane protein no 0.37
    15 RR42_RS05335 aldehyde oxidase no 0.37
    16 RR42_RS16960 ABC transporter ATP-binding protein no 0.37
    17 RR42_RS12530 molybdenum cofactor biosynthesis protein MoaA 0.28 0.37
    18 RR42_RS14145 (2Fe-2S)-binding protein no 0.36
    19 RR42_RS16970 ABC transporter ATP-binding protein no 0.36
    20 RR42_RS16980 branched-chain amino acid ABC transporter substrate-binding protein no 0.36

    Or look for negative cofitness