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Cofit
Protein
Homologs
Top cofit genes for RR42_RS05385 from
Cupriavidus basilensis FW507-4G11
LOG family protein
SEED: Lysine decarboxylase family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS28925
glucan biosynthesis protein G
no
0.44
2
RR42
_RS28335
ferredoxin
no
0.40
3
RR42
_RS00680
ABC transporter permease
0.88
0.39
4
RR42
_RS26495
carbon monoxide dehydrogenase
no
0.39
5
RR42
_RS09880
glucosamine--fructose-6-phosphate aminotransferase
no
0.37
6
RR42
_RS22480
FAD-dependent oxidoreductase
0.23
0.37
7
RR42
_RS30175
beta-glucosidase
no
0.37
8
RR42
_RS24585
hypothetical protein
no
0.37
9
RR42
_RS07470
arginyl-tRNA-protein transferase
0.31
0.36
10
RR42
_RS19070
DNA-directed RNA polymerase sigma-70 factor
0.18
0.36
11
RR42
_RS01285
acyl-CoA dehydrogenase
no
0.35
12
RR42
_RS16480
diguanylate cyclase
no
0.35
13
RR42
_RS13975
chemotaxis protein
no
0.35
14
RR42
_RS26640
2-keto-3-deoxy-L-rhamnonate aldolase
no
0.34
15
RR42
_RS26565
5'-3' exonuclease
no
0.34
16
RR42
_RS22810
3-oxoacyl-ACP reductase
no
0.34
17
RR42
_RS10820
peptide ABC transporter ATP-binding protein
no
0.34
18
RR42
_RS28415
diguanylate cyclase
no
0.33
19
RR42
_RS32210
AraC family transcriptional regulator
0.31
0.33
20
RR42
_RS02510
3-hydroxyacyl-CoA dehydrogenase
0.34
0.33
Or look for
negative cofitness