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Cofit
Protein
Homologs
Top cofit genes for RR42_RS04605 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Probable transmembrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS01875
cytochrome C oxidase subunit II
0.65
0.37
2
RR42
_RS21220
iron transporter FeoB
no
0.36
3
RR42
_RS06095
hypothetical protein
0.34
0.35
4
RR42
_RS01940
glycosyl transferase
no
0.33
5
RR42
_RS25685
chromate resistance protein
no
0.33
6
RR42
_RS06540
hypothetical protein
no
0.32
7
RR42
_RS37075
hypothetical protein
no
0.32
8
RR42
_RS12550
hypothetical protein
0.47
0.32
9
RR42
_RS09280
hypothetical protein
no
0.31
10
RR42
_RS11365
LysR family transcriptional regulator
no
0.31
11
RR42
_RS21360
ABC transporter permease
no
0.31
12
RR42
_RS23420
3-oxoacyl-ACP reductase
no
0.31
13
RR42
_RS16535
hypothetical protein
no
0.31
14
RR42
_RS24905
alpha/beta hydrolase
no
0.31
15
RR42
_RS28615
ABC transporter substrate-binding protein
no
0.30
16
RR42
_RS13915
ATPase
no
0.30
17
RR42
_RS01085
chemotaxis protein CheY
no
0.30
18
RR42
_RS29235
hypothetical protein
no
0.30
19
RR42
_RS01915
cytochrome C oxidase subunit I
0.75
0.29
20
RR42
_RS19115
cation tolerance protein CutA
no
0.29
Or look for
negative cofitness