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  • Top cofit genes for RR42_RS04535 from Cupriavidus basilensis FW507-4G11

    cysteine synthase
    SEED: Cysteine synthase B (EC 2.5.1.47)
    KEGG: cysteine synthase B

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.84 0.81
    2 RR42_RS16245 uroporphyrin-III methyltransferase 0.84 0.80
    3 RR42_RS16270 sulfite reductase 0.93 0.80
    4 RR42_RS06485 chorismate synthase 0.74 0.79
    5 RR42_RS17645 shikimate dehydrogenase 0.79 0.79
    6 RR42_RS16250 sulfate adenylyltransferase 0.93 0.79
    7 RR42_RS16255 sulfate adenylyltransferase 0.95 0.78
    8 RR42_RS19005 3-dehydroquinate synthase 0.77 0.77
    9 RR42_RS01160 homoserine O-acetyltransferase 0.93 0.77
    10 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase 0.75 0.76
    11 RR42_RS14320 O-succinylhomoserine sulfhydrylase 0.95 0.76
    12 RR42_RS04460 chorismate mutase 0.81 0.75
    13 RR42_RS16280 transcriptional regulator 0.68 0.75
    14 RR42_RS16265 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) 0.91 0.74
    15 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.88 0.74
    16 RR42_RS14400 isopropylmalate isomerase 0.94 0.73
    17 RR42_RS16275 membrane protein no 0.72
    18 RR42_RS14390 3-isopropylmalate dehydratase 0.93 0.72
    19 RR42_RS01290 thiamine biosynthesis protein ThiC 0.94 0.71
    20 RR42_RS19010 shikimate kinase 0.73 0.71

    Or look for negative cofitness