Top cofit genes for RR42_RS04400 from Cupriavidus basilensis FW507-4G11

ABC transporter permease
SEED: Amino acid ABC transporter, permease protein
KEGG: polar amino acid transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS30045		RND transporter	no	0.44
2	RR42_RS15430		peptidase	no	0.44
3	RR42_RS17485		hypothetical protein	no	0.44
4	RR42_RS19420		hypothetical protein	no	0.43
5	RR42_RS35555		hypothetical protein	no	0.43
6	RR42_RS14875		hypothetical protein	no	0.42
7	RR42_RS05960		multidrug DMT transporter permease	no	0.41
8	RR42_RS00645		allophanate hydrolase	no	0.40
9	RR42_RS27120		amino acid ABC transporter permease	no	0.39
10	RR42_RS19640		hypothetical protein	no	0.38
11	RR42_RS01485		phosphonate transporter	no	0.38
12	RR42_RS26630		hypothetical protein	no	0.38
13	RR42_RS36335		enoyl-CoA hydratase	no	0.38
14	RR42_RS23110		isochorismatase	no	0.37
15	RR42_RS29755		membrane protein	no	0.37
16	RR42_RS09115		glucose-methanol-choline oxidoreductase	no	0.37
17	RR42_RS04375		magnesium transporter	0.36	0.37
18	RR42_RS16740		hypothetical protein	no	0.37
19	RR42_RS29585		aspartate racemase	no	0.37
20	RR42_RS22195		acyl-CoA transferase	no	0.36

Or look for negative cofitness