Private Fitness
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Gene
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Cofit
Protein
Homologs
Top cofit genes for RR42_RS04045 from
Cupriavidus basilensis FW507-4G11
proline hydroxylase
KEGG: SM-20-related protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS00445
membrane protein
no
0.50
2
RR42
_RS11425
MFS transporter
no
0.33
3
RR42
_RS10240
hypothetical protein
no
0.32
4
RR42
_RS25195
AMP-dependent synthetase
no
0.31
5
RR42
_RS24180
3-isopropylmalate dehydratase
no
0.30
6
RR42
_RS29660
amino acid transporter
no
0.30
7
RR42
_RS34035
N-ethylmaleimide reductase
no
0.30
8
RR42
_RS18975
ABC transporter substrate-binding protein
no
0.30
9
RR42
_RS14420
branched-chain amino acid transporter permease subunit LivH
no
0.30
10
RR42
_RS16375
short-chain dehydrogenase
no
0.30
11
RR42
_RS14425
leucine ABC transporter substrate-binding protein
no
0.30
12
RR42
_RS07775
ABC transporter substrate-binding protein
no
0.30
13
RR42
_RS21350
peptide ABC transporter substrate-binding protein
no
0.29
14
RR42
_RS35685
flagellar rod assembly protein FlgJ
no
0.29
15
RR42
_RS25160
hypothetical protein
no
0.29
16
RR42
_RS37515
hypothetical protein
0.22
0.29
17
RR42
_RS01045
Fur family transcriptional regulator
no
0.29
18
RR42
_RS34895
hypothetical protein
no
0.28
19
RR42
_RS01490
histidine kinase
no
0.28
20
RR42
_RS22330
ester cyclase
no
0.28
Or look for
negative cofitness