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Cofit
Protein
Homologs
Top cofit genes for RR42_RS04010 from
Cupriavidus basilensis FW507-4G11
transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS07540
ABC transporter permease
no
0.53
2
RR42
_RS11155
long-chain fatty acid--CoA ligase
no
0.52
3
RR42
_RS11145
ABC transporter permease
no
0.51
4
RR42
_RS11140
ABC transporter permease
no
0.49
5
RR42
_RS11150
branched-chain amino acid ABC transporter substrate-binding protein
no
0.49
6
RR42
_RS07545
branched-chain amino acid ABC transporter substrate-binding protein
no
0.48
7
RR42
_RS21430
alpha-ketoglutarate permease
no
0.48
8
RR42
_RS35905
LacI family transcriptional regulator
no
0.48
9
RR42
_RS02330
trehalose-6-phosphate synthase
no
0.47
10
RR42
_RS09100
transcriptional regulator
no
0.46
11
RR42
_RS07535
ABC transporter permease
no
0.46
12
RR42
_RS11130
mannosyltransferase
no
0.46
13
RR42
_RS24265
hypothetical protein
no
0.45
14
RR42
_RS20420
maltoporin
no
0.45
15
RR42
_RS34870
hypothetical protein
no
0.44
16
RR42
_RS21425
hypothetical protein
no
0.44
17
RR42
_RS36695
heavy metal resistance protein CzcA
no
0.44
18
RR42
_RS11135
branched-chain amino acid ABC transporter substrate-binding protein
no
0.42
19
RR42
_RS24605
TetR family transcriptional regulator
no
0.42
20
RR42
_RS20380
histidine kinase
no
0.42
Or look for
negative cofitness