Top cofit genes for RR42_RS03995 from Cupriavidus basilensis FW507-4G11

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS30785		cytosine deaminase	0.58	0.44
2	RR42_RS07680		ABC transporter substrate-binding protein	no	0.41
3	RR42_RS02615		membrane protein	no	0.39
4	RR42_RS23345		hypothetical protein	no	0.39
5	RR42_RS29365		ArsR family transcriptional regulator	no	0.38
6	RR42_RS31130		hypothetical protein	no	0.37
7	RR42_RS23855		hypothetical protein	no	0.37
8	RR42_RS27710		LysR family transcriptional regulator	no	0.37
9	RR42_RS11210		microcystin LR degradation protein MlrC	no	0.37
10	RR42_RS28675		MarR family transcriptional regulator	no	0.37
11	RR42_RS18785		hypothetical protein	no	0.36
12	RR42_RS29740		hypothetical protein	no	0.36
13	RR42_RS11960		hypothetical protein	no	0.36
14	RR42_RS25695		chromate transporter	no	0.35
15	RR42_RS26925		membrane protein	no	0.35
16	RR42_RS32780		multidrug transporter	no	0.35
17	RR42_RS12010		ABC transporter	no	0.35
18	RR42_RS22670		penicillin acylase	no	0.35
19	RR42_RS07950		ABC transporter substrate-binding protein	no	0.34
20	RR42_RS00910		hypothetical protein	no	0.34

Or look for negative cofitness