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Cofit
Protein
Homologs
Top cofit genes for RR42_RS03255 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
SEED: UPF0311 protein RPA1785
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS13250
LacI family transcriptional regulator
no
0.44
2
RR42
_RS13215
transcriptional regulator
no
0.43
3
RR42
_RS13200
stationary phase survival protein SurE
no
0.40
4
RR42
_RS03340
membrane protein
no
0.40
5
RR42
_RS03315
RND transporter MFP subunit
no
0.39
6
RR42
_RS15935
C4-dicarboxylate ABC transporter
no
0.39
7
RR42
_RS13245
ABC transporter substrate-binding protein
no
0.39
8
RR42
_RS02865
chloride channel protein
no
0.38
9
RR42
_RS13005
damage-inducible protein
no
0.38
10
RR42
_RS10875
hypothetical protein
no
0.37
11
RR42
_RS00530
hypothetical protein
no
0.37
12
RR42
_RS27495
hypothetical protein
no
0.36
13
RR42
_RS02885
acetylornithine deacetylase
no
0.36
14
RR42
_RS15850
glycerol acyltransferase
no
0.36
15
RR42
_RS05285
quinonprotein alcohol dehydrogenase
0.14
0.35
16
RR42
_RS32850
universal stress protein UspA
no
0.35
17
RR42
_RS19910
membrane protein
no
0.35
18
RR42
_RS13290
ribonucleoside-diphosphate reductase
no
0.35
19
RR42
_RS07400
thioesterase
no
0.34
20
RR42
_RS13235
ABC transporter permease
no
0.34
Or look for
negative cofitness