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  • Top cofit genes for RR42_RS03060 from Cupriavidus basilensis FW507-4G11

    MFS transporter
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS13875 sodium:solute symporter 0.53 0.65
    2 RR42_RS17315 D-lactate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6) (from data) 0.71 0.59
    3 RR42_RS17310 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.66 0.58
    4 RR42_RS29910 LacI family transcriptional regulator 0.32 0.56
    5 RR42_RS03070 histidine kinase 0.85 0.56
    6 RR42_RS03065 membrane protein no 0.52
    7 RR42_RS03075 transcriptional regulator 0.83 0.51
    8 RR42_RS17290 LysR family transcriptional regulator no 0.47
    9 RR42_RS17300 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.39 0.45
    10 RR42_RS19825 LysR family transcriptional regulator 0.36 0.41
    11 RR42_RS33510 permease no 0.41
    12 RR42_RS15445 7-cyano-7-deazaguanine synthase 0.22 0.40
    13 RR42_RS18430 prevent-host-death protein no 0.39
    14 RR42_RS01165 methionine biosynthesis protein MetW 0.80 0.39
    15 RR42_RS05970 endonuclease III no 0.39
    16 RR42_RS18795 hypothetical protein no 0.38
    17 RR42_RS06795 hypothetical protein no 0.37
    18 RR42_RS16260 phosphoadenosine phosphosulfate reductase no 0.36
    19 RR42_RS34385 glutathione peroxidase no 0.36
    20 RR42_RS26685 ferredoxin-NADP reductase no 0.36

    Or look for negative cofitness