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  • Top cofit genes for RR42_RS03010 from Cupriavidus basilensis FW507-4G11

    acetyl-CoA acetyltransferase
    SEED: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
    KEGG: acetyl-CoA acyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS32105 hypothetical protein no 0.35
    2 RR42_RS30245 peptide ABC transporter permease no 0.35
    3 RR42_RS04410 cyanophycin synthetase no 0.35
    4 RR42_RS22180 hypothetical protein 0.22 0.34
    5 RR42_RS04420 required for efflux of an amino acid polymer (from data) no 0.34
    6 RR42_RS15080 GntR family transcriptional regulator no 0.31
    7 RR42_RS05755 enoyl-CoA hydratase no 0.31
    8 RR42_RS04415 ABC transporter no 0.31
    9 RR42_RS07910 RND transporter MFP subunit 0.50 0.30
    10 RR42_RS26955 methyltransferase no 0.29
    11 RR42_RS22010 histidine kinase no 0.29
    12 RR42_RS19895 elongation factor GreAB no 0.28
    13 RR42_RS04405 cyanophycin synthetase no 0.28
    14 RR42_RS17385 LysR family transcriptional regulator no 0.27
    15 RR42_RS02430 sodium:solute symporter no 0.27
    16 RR42_RS24915 hypothetical protein no 0.27
    17 RR42_RS32220 glycosyl transferase family 2 no 0.27
    18 RR42_RS21725 ABC transporter substrate-binding protein 0.22 0.27
    19 RR42_RS10425 MFS transporter no 0.27
    20 RR42_RS09405 butanediol dehydrogenase no 0.27

    Or look for negative cofitness