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Cofit
Protein
Homologs
Top cofit genes for RR42_RS02560 from
Cupriavidus basilensis FW507-4G11
cysteine dioxygenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS02585
amino acid ABC transporter permease
no
0.83
2
RR42
_RS02575
ABC transporter
no
0.81
3
RR42
_RS02580
amino acid ABC transporter permease
no
0.79
4
RR42
_RS02590
amino acid ABC transporter ATP-binding protein
no
0.72
5
RR42
_RS33515
hypothetical protein
no
0.70
6
RR42
_RS32990
1-aminocyclopropane-1-carboxylate deaminase
no
0.68
7
RR42
_RS18000
cell division protein ZapD
no
0.55
8
RR42
_RS15380
kynurenine formamidase
no
0.54
9
RR42
_RS17205
DNA mismatch repair protein
no
0.53
10
RR42
_RS01905
cytochrome C oxidase subunit II
no
0.51
11
RR42
_RS02565
LysR family transcriptional regulator
no
0.50
12
RR42
_RS02765
aminoglycoside phosphotransferase
no
0.50
13
RR42
_RS19695
cytochrome C protein
0.18
0.50
14
RR42
_RS06665
reverse transcriptase
no
0.49
15
RR42
_RS18855
preprotein translocase
no
0.49
16
RR42
_RS00950
glyoxylate reductase
no
0.49
17
RR42
_RS27000
cobalt ABC transporter substrate-binding protein
no
0.49
18
RR42
_RS06555
3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A
(from data)
no
0.47
19
RR42
_RS33520
ankyrin
no
0.47
20
RR42
_RS30930
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
no
0.45
Or look for
negative cofitness