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Cofit
Protein
Homologs
Top cofit genes for RR42_RS02440 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS30960
transcriptional regulator
no
0.53
2
RR42
_RS02405
membrane protein
0.41
0.48
3
RR42
_RS30830
GTP cyclohydrolase
no
0.45
4
RR42
_RS36110
membrane protein
0.59
0.44
5
RR42
_RS22930
cytochrome C peroxidase
no
0.44
6
RR42
_RS17885
ABC transporter permease
no
0.43
7
RR42
_RS15070
membrane protein
no
0.43
8
RR42
_RS13950
hypothetical protein
no
0.43
9
RR42
_RS11120
DNA-binding protein
0.53
0.42
10
RR42
_RS15800
aldo/keto reductase
no
0.42
11
RR42
_RS13390
enoyl-ACP reductase
0.30
0.41
12
RR42
_RS19480
secretion system protein G
no
0.41
13
RR42
_RS22420
penicillin-binding protein
0.40
0.39
14
RR42
_RS18840
2-alkenal reductase
0.60
0.38
15
RR42
_RS36040
TonB-dependent receptor
no
0.38
16
RR42
_RS22935
metal transporter
no
0.37
17
RR42
_RS15710
LPS biosynthesis protein
0.34
0.37
18
RR42
_RS11180
peptidylprolyl isomerase
0.58
0.37
19
RR42
_RS15790
aminotransferase class III
no
0.37
20
RR42
_RS04355
recombination factor protein RarA
no
0.36
Or look for
negative cofitness