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Cofit
Protein
Homologs
Top cofit genes for RR42_RS02305 from
Cupriavidus basilensis FW507-4G11
porin
SEED: Carbohydrate-selective porin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS18330
sulfonate ABC transporter permease
no
0.54
2
RR42
_RS14490
aconitate hydratase
no
0.44
3
RR42
_RS12965
glycerol-3-phosphate transporter permease
no
0.42
4
RR42
_RS37290
PadR family transcriptional regulator
no
0.42
5
RR42
_RS03280
LysR family transcriptional regulator
no
0.42
6
RR42
_RS23845
hypothetical protein
no
0.41
7
RR42
_RS12970
glycerol-3-phosphate ABC transporter substrate-binding protein
no
0.40
8
RR42
_RS09005
competence protein ComJ
no
0.40
9
RR42
_RS23180
ligand-gated channel
no
0.40
10
RR42
_RS02120
glutamine amidotransferase
no
0.39
11
RR42
_RS35445
ArsR family transcriptional regulator
no
0.38
12
RR42
_RS25585
membrane protein
no
0.38
13
RR42
_RS17625
damage-inducible protein CinA
no
0.36
14
RR42
_RS18900
membrane protein
no
0.36
15
RR42
_RS08790
zinc-binding protein
no
0.36
16
RR42
_RS03515
hypothetical protein
no
0.35
17
RR42
_RS13435
polyphosphate kinase
0.84
0.35
18
RR42
_RS20095
peroxiredoxin
no
0.34
19
RR42
_RS00255
ABC transporter permease
no
0.34
20
RR42
_RS12955
glycerol-3-phosphate ABC transporter ATP-binding protein
no
0.33
Or look for
negative cofitness