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  • Top cofit genes for RR42_RS02080 from Cupriavidus basilensis FW507-4G11

    ribosome hibernation promoting factor
    SEED: Ribosome hibernation protein YhbH
    KEGG: putative sigma-54 modulation protein

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS29970 IclR family transcriptional regulator no 0.66
    2 RR42_RS31160 IclR family transcriptional regulator no 0.65
    3 RR42_RS36125 IclR family transcriptional regulator 0.61 0.64
    4 RR42_RS22490 IclR family transcriptional regulator no 0.61
    5 RR42_RS22495 hypothetical protein no 0.61
    6 RR42_RS21255 LysR family transcriptional regulator 0.58 0.59
    7 RR42_RS35920 3-oxoadipate CoA-transferase no 0.58
    8 RR42_RS35910 short-chain dehydrogenase no 0.58
    9 RR42_RS36595 acyl-CoA dehydrogenase no 0.57
    10 RR42_RS24350 malyl-CoA thiolesterase 0.74 0.57
    11 RR42_RS31120 cupin no 0.55
    12 RR42_RS35945 DNA-binding protein 0.82 0.55
    13 RR42_RS15155 CoA-transferase no 0.53
    14 RR42_RS21260 isovaleryl-CoA dehydrogenase no 0.51
    15 RR42_RS26840 DNA-binding protein 0.83 0.49
    16 RR42_RS31130 hypothetical protein no 0.48
    17 RR42_RS35930 DNA repair exonuclease no 0.48
    18 RR42_RS27400 membrane protein no 0.48
    19 RR42_RS11095 3-hydroxyacyl-CoA dehydrogenase no 0.47
    20 RR42_RS24505 hypothetical protein no 0.47

    Or look for negative cofitness