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Cofit
Protein
Homologs
Top cofit genes for RR42_RS02035 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
SEED: FIG140336: TPR domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS01270
3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase
no
0.57
2
RR42
_RS22430
2OG-Fe(II) oxygenase
no
0.49
3
RR42
_RS01820
peptidase S41
0.99
0.46
4
RR42
_RS13030
ATP-dependent helicase
0.67
0.45
5
RR42
_RS36270
patatin
no
0.44
6
RR42
_RS32260
squalene--hopene cyclase
no
0.44
7
RR42
_RS22445
phosphoenolpyruvate phosphomutase
no
0.43
8
RR42
_RS32235
hopanoid biosynthesis associated radical SAM protein HpnH
0.44
0.42
9
RR42
_RS28595
squalene--hopene cyclase
no
0.41
10
RR42
_RS04405
cyanophycin synthetase
no
0.40
11
RR42
_RS32225
NAD-dependent dehydratase
no
0.40
12
RR42
_RS20450
16S rRNA methyltransferase
0.51
0.40
13
RR42
_RS36665
hypothetical protein
no
0.39
14
RR42
_RS32240
ABC transporter
0.51
0.37
15
RR42
_RS04410
cyanophycin synthetase
no
0.37
16
RR42
_RS20650
multidrug efflux RND transporter permease subunit
0.59
0.36
17
RR42
_RS14925
hypothetical protein
no
0.36
18
RR42
_RS14625
formimidoylglutamase
0.76
0.36
19
RR42
_RS06245
SAM-dependent methyltransferase
no
0.36
20
RR42
_RS15020
(2Fe-2S)-binding protein
0.69
0.36
Or look for
negative cofitness