Top cofit genes for RR42_RS01820 from Cupriavidus basilensis FW507-4G11

peptidase S41
SEED: Carboxyl-terminal protease (EC 3.4.21.102)
KEGG: carboxyl-terminal processing protease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS32235		hopanoid biosynthesis associated radical SAM protein HpnH	0.51	0.63
2	RR42_RS36665		hypothetical protein	no	0.59
3	RR42_RS28595		squalene--hopene cyclase	no	0.56
4	RR42_RS32260		squalene--hopene cyclase	0.49	0.55
5	RR42_RS22445		phosphoenolpyruvate phosphomutase	no	0.54
6	RR42_RS15825		capsular biosynthesis protein	0.69	0.51
7	RR42_RS36265		esterase	no	0.50
8	RR42_RS01270		3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase	no	0.49
9	RR42_RS06255		lipoprotein	0.40	0.49
10	RR42_RS14495		hypothetical protein	no	0.47
11	RR42_RS15800		aldo/keto reductase	no	0.47
12	RR42_RS02035		hypothetical protein	0.99	0.46
13	RR42_RS22450		phosphonopyruvate decarboxylase	no	0.46
14	RR42_RS04745		uracil phosphoribosyltransferase	no	0.46
15	RR42_RS13125		pyrrolo-quinoline quinone	0.70	0.45
16	RR42_RS32240		ABC transporter	0.50	0.44
17	RR42_RS22430		2OG-Fe(II) oxygenase	no	0.44
18	RR42_RS03145		peptidase M48	0.61	0.43
19	RR42_RS32225		NAD-dependent dehydratase	0.47	0.43
20	RR42_RS32230		4-hydroxy-3-methylbut-2-enyl diphosphate reductase	no	0.43

Or look for negative cofitness