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  • Top cofit genes for RR42_RS00725 from Cupriavidus basilensis FW507-4G11

    hypothetical protein
    SEED: Alginate regulatory protein AlgP

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS12980 chemotaxis protein CheY no 0.66
    2 RR42_RS11885 (protein-PII) uridylyltransferase no 0.62
    3 RR42_RS12985 histidine kinase no 0.62
    4 RR42_RS15905 phosphoenolpyruvate carboxylase no 0.59
    5 RR42_RS16960 ABC transporter ATP-binding protein no 0.56
    6 RR42_RS07605 poly-beta-hydroxybutyrate polymerase no 0.55
    7 RR42_RS16970 ABC transporter ATP-binding protein no 0.54
    8 RR42_RS16975 ABC transporter permease no 0.53
    9 RR42_RS16965 ABC transporter no 0.53
    10 RR42_RS11790 phosphoenolpyruvate synthase no 0.52
    11 RR42_RS16980 branched-chain amino acid ABC transporter substrate-binding protein no 0.52
    12 RR42_RS21300 GntR family transcriptional regulator no 0.52
    13 RR42_RS33255 protein-tyrosine phosphatase no 0.51
    14 RR42_RS33240 GDP-L-fucose synthase no 0.51
    15 RR42_RS08365 hypothetical protein no 0.50
    16 RR42_RS33245 mannose-1-phosphate guanyltransferase no 0.50
    17 RR42_RS33235 GDP-mannose 4,6-dehydratase no 0.49
    18 RR42_RS21280 L-lactate permease no 0.49
    19 RR42_RS33250 tyrosine protein kinase no 0.48
    20 RR42_RS33260 multidrug MFS transporter no 0.48

    Or look for negative cofitness