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Cofit
Protein
Homologs
Top cofit genes for RALBFv3_RS23155 from
Ralstonia solanacearum IBSBF1503
carbohydrate porin
SEED: Carbohydrate-selective porin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RALBFv3
_RS19895
elongation factor G
0.54
0.91
2
RALBFv3
_RS14510
beta-N-acetylhexosaminidase
no
0.90
3
RALBFv3
_RS04815
ATP-dependent Clp protease adaptor ClpS
0.52
0.90
4
RALBFv3
_RS03270
aminopeptidase N
no
0.90
5
RALBFv3
_RS06725
cytochrome b
0.49
0.90
6
RALBFv3
_RS23145
divalent metal cation transporter
0.49
0.89
7
RALBFv3
_RS05920
cation transporter
0.50
0.89
8
RALBFv3
_RS09860
lytic transglycosylase
no
0.88
9
RALBFv3
_RS19070
hypothetical protein
0.38
0.88
10
RALBFv3
_RS11990
MFS transporter
no
0.88
11
RALBFv3
_RS03055
RNA polymerase sigma factor
0.42
0.87
12
RALBFv3
_RS16095
cupin domain-containing protein
0.40
0.87
13
RALBFv3
_RS05815
class I SAM-dependent RNA methyltransferase
no
0.87
14
RALBFv3
_RS07025
cytochrome c biogenesis protein ResB
no
0.87
15
RALBFv3
_RS07725
general secretion pathway protein GspL
no
0.86
16
RALBFv3
_RS10800
TlpA family protein disulfide reductase
no
0.86
17
RALBFv3
_RS10520
carbonate dehydratase
no
0.86
18
RALBFv3
_RS07020
c-type cytochrome biogenesis protein CcsB
no
0.86
19
RALBFv3
_RS07755
type II secretion system protein GspF
no
0.86
20
RALBFv3
_RS05980
TlpA family protein disulfide reductase
0.45
0.86
Or look for
negative cofitness