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Cofit
Protein
Homologs
Top cofit genes for RALBFv3_RS10010 from
Ralstonia solanacearum IBSBF1503
surface antigen
SEED: surface antigen gene
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RALBFv3
_RS01305
ABC transporter ATP-binding protein
no
0.41
2
RALBFv3
_RS13035
tryptophan 2,3-dioxygenase
no
0.39
3
RALBFv3
_RS10450
hypothetical protein
no
0.37
4
RALBFv3
_RS15455
5-dehydro-2-deoxygluconokinase
no
0.35
5
RALBFv3
_RS03120
ABC transporter permease
no
0.35
6
RALBFv3
_RS17200
hypothetical protein
no
0.35
7
RALBFv3
_RS09235
membrane protein
0.41
0.35
8
RALBFv3
_RS18110
RND transporter
no
0.34
9
RALBFv3
_RS14145
spermidine synthase
no
0.33
10
RALBFv3
_RS18835
hypothetical protein
no
0.33
11
RALBFv3
_RS08760
hypothetical protein
no
0.33
12
RALBFv3
_RS18195
hybrid sensor histidine kinase/response regulator
no
0.33
13
RALBFv3
_RS19175
hypothetical protein
no
0.33
14
RALBFv3
_RS18935
ABC transporter ATP-binding protein
no
0.33
15
RALBFv3
_RS08365
DNA-binding protein
0.48
0.32
16
RALBFv3
_RS20470
amino acid ABC transporter permease
no
0.32
17
RALBFv3
_RS20335
curli production assembly protein CsgG
no
0.32
18
RALBFv3
_RS14630
salicylate-5-hydroxylase small oxygenase NagH
no
0.32
19
RALBFv3
_RS03190
type 1 glutamine amidotransferase domain-containing protein
no
0.32
20
RALBFv3
_RS22895
ATPase
no
0.32
Or look for
negative cofitness