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Cofit
Top cofit genes for Psyr_RNA78 from
Pseudomonas syringae pv. syringae B728a
5S ribosomal RNA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3172
Glycosyl transferase, family 3
no
0.40
2
Psyr
_RNA61
tRNA-Gly
no
0.38
3
Psyr
_2813
conserved hypothetical protein
no
0.38
4
Psyr
_2564
transcriptional regulator, GntR family
no
0.36
5
Psyr
_1615
Patatin
no
0.34
6
Psyr
_3302
mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP)
no
0.34
7
Psyr
_1432
hypothetical protein
no
0.33
8
Psyr
_2930
Glyoxalase/bleomycin resistance protein/dioxygenase
no
0.31
9
Psyr
_4712
serine hydroxymethyltransferase
no
0.31
10
Psyr
_4958
AAA ATPase, central region:Clp, N terminal:Clp, N terminal
no
0.31
11
Psyr
_0330
hypothetical protein
no
0.30
12
Psyr
_2951
transcriptional regulator, LysR family
no
0.30
13
Psyr
_2312
Protein of unknown function DUF24
no
0.30
14
Psyr
_4650
CDS
no
0.30
15
Psyr
_1127
Heavy metal response regulator
no
0.30
16
Psyr
_2714
putative transmembrane protein
no
0.30
17
Psyr
_1301
Protein of unknown function DUF533
no
0.30
18
Psyr
_3210
Protein of unknown function UPF0118
no
0.29
19
Psyr
_1250
conserved hypothetical protein
no
0.29
20
Psyr
_3968
Protein of unknown function DUF112
no
0.29
Or look for
negative cofitness