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  • Top cofit genes for Psyr_RNA28 from Pseudomonas syringae pv. syringae B728a

    tRNA-Val

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein no 0.39
    2 Psyr_3080 CDS no 0.39
    3 Psyr_3773 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.38
    4 Psyr_2288 outer membrane transport energization protein ExbB no 0.37
    5 Psyr_3877 Succinylglutamate desuccinylase/aspartoacylase no 0.37
    6 Psyr_1515 hypothetical protein no 0.37
    7 Psyr_3423 coproporphyrinogen III oxidase, anaerobic no 0.37
    8 Psyr_2978 PAS no 0.36
    9 Psyr_1147 Acetyltransferase (isoleucine patch superfamily)-like protein no 0.36
    10 Psyr_0615 conserved hypothetical protein no 0.36
    11 Psyr_5055 YeeE/YedE no 0.36
    12 Psyr_2179 General substrate transporter:Major facilitator superfamily no 0.36
    13 Psyr_4326 type III effector HopI1 no 0.36
    14 Psyr_4914 amino acid ABC transporter membrane protein 2, PAAT family no 0.35
    15 Psyr_5132 Glucose-inhibited division protein A subfamily no 0.35
    16 Psyr_3103 phosphate ABC transporter ATP-binding protein, PhoT family no 0.35
    17 Psyr_3701 thioredoxin, putative no 0.35
    18 Psyr_4739 tRNA (guanine-N(7)-)-methyltransferase no 0.34
    19 Psyr_0610 ABC-2 no 0.33
    20 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit no 0.33

    Or look for negative cofitness