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Cofit
Top cofit genes for Psyr_RNA28 from
Pseudomonas syringae pv. syringae B728a
tRNA-Val
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3419
4Fe-4S ferredoxin, iron-sulfur binding protein
no
0.39
2
Psyr
_3080
CDS
no
0.39
3
Psyr
_3773
GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal
no
0.38
4
Psyr
_2288
outer membrane transport energization protein ExbB
no
0.37
5
Psyr
_3877
Succinylglutamate desuccinylase/aspartoacylase
no
0.37
6
Psyr
_1515
hypothetical protein
no
0.37
7
Psyr
_3423
coproporphyrinogen III oxidase, anaerobic
no
0.37
8
Psyr
_2978
PAS
no
0.36
9
Psyr
_1147
Acetyltransferase (isoleucine patch superfamily)-like protein
no
0.36
10
Psyr
_0615
conserved hypothetical protein
no
0.36
11
Psyr
_5055
YeeE/YedE
no
0.36
12
Psyr
_2179
General substrate transporter:Major facilitator superfamily
no
0.36
13
Psyr
_4326
type III effector HopI1
no
0.36
14
Psyr
_4914
amino acid ABC transporter membrane protein 2, PAAT family
no
0.35
15
Psyr
_5132
Glucose-inhibited division protein A subfamily
no
0.35
16
Psyr
_3103
phosphate ABC transporter ATP-binding protein, PhoT family
no
0.35
17
Psyr
_3701
thioredoxin, putative
no
0.35
18
Psyr
_4739
tRNA (guanine-N(7)-)-methyltransferase
no
0.34
19
Psyr
_0610
ABC-2
no
0.33
20
Psyr
_3842
SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit
no
0.33
Or look for
negative cofitness