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  • Top cofit genes for Psyr_5132 from Pseudomonas syringae pv. syringae B728a

    Glucose-inhibited division protein A subfamily
    SEED: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
    KEGG: glucose inhibited division protein A

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4112 Protein of unknown function UPF0011 no 0.42
    2 Psyr_5133 tRNA modification GTPase trmE 1.00 0.42
    3 Psyr_1469 hypothetical protein no 0.41
    4 Psyr_1662 tRNA pseudouridine synthase 0.88 0.39
    5 Psyr_4886 Peptidase M23B 0.47 0.39
    6 Psyr_4259 ATP-dependent protease, putative 0.25 0.39
    7 Psyr_4194 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal 0.80 0.38
    8 Psyr_1515 hypothetical protein no 0.38
    9 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.67 0.37
    10 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.40 0.37
    11 Psyr_2978 PAS no 0.37
    12 Psyr_4686 8-amino-7-oxononanoate synthase 0.39 0.36
    13 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein no 0.36
    14 Psyr_4203 SsrA-binding protein 0.67 0.36
    15 Psyr_0881 hypothetical protein no 0.35
    16 Psyr_RNA28 tRNA-Val no 0.35
    17 Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP 0.75 0.35
    18 Psyr_3581 ribosomal large subunit pseudouridine synthase B 0.48 0.35
    19 Psyr_4381 arginine decarboxylase 0.52 0.35
    20 Psyr_4687 biotin synthase 0.40 0.34

    Or look for negative cofitness