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  • Top cofit genes for Psyr_5131 from Pseudomonas syringae pv. syringae B728a

    16S rRNA m(7)G-527 methyltransferase
    SEED: rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
    KEGG: ribosomal RNA small subunit methyltransferase G

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0993 transcriptional regulator, LuxR family no 0.50
    2 Psyr_1542 quinolinate synthetase 0.68 0.44
    3 Psyr_3035 Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal:Glycoside hydrolase, family 3, C-terminal no 0.43
    4 Psyr_1109 6-phosphogluconate dehydratase 0.33 0.40
    5 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.51 0.39
    6 Psyr_0847 acetolactate synthase, small subunit 0.35 0.38
    7 Psyr_4866 Aminotransferase class-III 0.51 0.37
    8 Psyr_3825 transcriptional regulator, LysR family no 0.37
    9 Psyr_2725 Thiolase 0.16 0.37
    10 Psyr_0544 hydroxymethylpyrimidine synthase 0.58 0.37
    11 Psyr_0995 Flavin reductase-like protein 0.52 0.37
    12 Psyr_2469 Propionyl-CoA carboxylase 0.75 0.36
    13 Psyr_0848 ketol-acid reductoisomerase no 0.36
    14 Psyr_2510 2-keto-3-deoxygluconate kinase no 0.36
    15 Psyr_0473 Methionine biosynthesis MetW 0.36 0.36
    16 Psyr_0346 Acriflavin resistance protein 0.76 0.36
    17 Psyr_0059 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal 0.73 0.36
    18 Psyr_4573 Histidine triad (HIT) protein 0.28 0.36
    19 Psyr_4006 transcriptional regulator, TetR family 0.79 0.36
    20 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.93 0.36

    Or look for negative cofitness