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  • Top cofit genes for Psyr_5054 from Pseudomonas syringae pv. syringae B728a

    Protein of unknown function UPF0187
    SEED: probable membrane protein STY1534
    KEGG: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0960 conserved hypothetical protein no 0.33
    2 Psyr_2917 Prokaryotic protein of unknown function DUF849 no 0.33
    3 Psyr_3722 Amino acid adenylation no 0.32
    4 Psyr_3336 transcriptional regulator, LacI family no 0.31
    5 Psyr_1330 23S rRNA m(1)G-745 methyltransferase no 0.30
    6 Psyr_4295 Histone deacetylase superfamily no 0.29
    7 Psyr_0129 conserved hypothetical protein no 0.29
    8 Psyr_0423 3-oxoacyl-(acyl-carrier-protein) reductase, putative no 0.29
    9 Psyr_4696 transcriptional regulator, LacI family no 0.28
    10 Psyr_3617 Thiopurine S-methyltransferase no 0.28
    11 Psyr_4044 Phospholipase D/Transphosphatidylase no 0.28
    12 Psyr_5074 conserved hypothetical protein no 0.28
    13 Psyr_2003 conserved hypothetical protein no 0.28
    14 Psyr_2414 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 no 0.27
    15 Psyr_1640 HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.11 0.27
    16 Psyr_0006 putative phenylacetaldoxime dehydratase no 0.27
    17 Psyr_2797 hypothetical protein no 0.27
    18 Psyr_1264 hypothetical protein no 0.27
    19 Psyr_1250 conserved hypothetical protein no 0.26
    20 Psyr_4376 regulatory protein, LuxR:Response regulator receiver no 0.26

    Or look for negative cofitness