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  • Top cofit genes for Psyr_5015 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: D-serine dehydratase transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0872 Alkaline phosphatase no 0.41
    2 Psyr_0851 Protein of unknown function UPF0191 0.33 0.40
    3 Psyr_3257 multisubunit potassium/proton antiporter, PhaG subunit no 0.39
    4 Psyr_1540 hypothetical protein no 0.37
    5 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein no 0.35
    6 Psyr_1808 conserved hypothetical protein no 0.34
    7 Psyr_1630 ABC transporter 0.53 0.34
    8 Psyr_0051 conserved hypothetical protein 0.20 0.34
    9 Psyr_0956 Cyclopropane-fatty-acyl-phospholipid synthase 0.30 0.33
    10 Psyr_1573 cyclic nucleotide-binding protein no 0.33
    11 Psyr_0217 conserved hypothetical protein no 0.33
    12 Psyr_1432 hypothetical protein no 0.32
    13 Psyr_1684 GGDEF domain protein no 0.32
    14 Psyr_3047 Helix-turn-helix motif protein no 0.31
    15 Psyr_3683 NLP/P60 no 0.31
    16 Psyr_4386 conserved hypothetical protein no 0.31
    17 Psyr_2593 ABC transporter 0.23 0.31
    18 Psyr_3613 Glutathione peroxidase 0.29 0.30
    19 Psyr_4619 multi-sensor signal transduction histidine kinase no 0.30
    20 Psyr_1338 Hypothetical protein no 0.30

    Or look for negative cofitness