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  • Top cofit genes for Psyr_4955 from Pseudomonas syringae pv. syringae B728a

    Protein of unknown function DUF1316
    SEED: Uncharacterized protein ImpF
    KEGG: type VI secretion system protein ImpF

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4340 phosphomethylpyrimidine kinase, putative 0.37 0.37
    2 Psyr_1610 ribosomal large subunit pseudouridine synthase A no 0.36
    3 Psyr_2898 Helix-turn-helix motif protein no 0.35
    4 Psyr_1544 SirA-like protein no 0.35
    5 Psyr_2056 CHAD 0.32 0.35
    6 Psyr_4740 thiazole-phosphate synthase no 0.34
    7 Psyr_1864 spermidine synthase no 0.34
    8 Psyr_4341 thiamine-phosphate diphosphorylase no 0.34
    9 Psyr_3916 methionine synthase (B12-independent) no 0.34
    10 Psyr_3904 Major intrinsic protein 0.29 0.34
    11 Psyr_1307 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt 0.37 0.34
    12 Psyr_2180 transcriptional regulator, LysR family no 0.33
    13 Psyr_2589 IucA/IucC no 0.33
    14 Psyr_2065 transcription elongation factor GreB no 0.33
    15 Psyr_1796 GCN5-related N-acetyltransferase no 0.32
    16 Psyr_4091 8-oxo-dGTPase no 0.32
    17 Psyr_0471 coproporphyrinogen III oxidase, anaerobic no 0.32
    18 Psyr_2230 Mn2+/Fe2+ transporter, NRAMP family no 0.32
    19 Psyr_2118 protein of unknown function DUF883 no 0.31
    20 Psyr_0951 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB no 0.31

    Or look for negative cofitness