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  • Top cofit genes for Psyr_4911 from Pseudomonas syringae pv. syringae B728a

    amino acid ABC transporter ATP-binding protein, PAAT family
    SEED: Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1)
    KEGG: polar amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3876 amino acid ABC transporter membrane protein 2, PAAT family 0.44 0.62
    2 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein no 0.59
    3 Psyr_4381 arginine decarboxylase 0.73 0.57
    4 Psyr_3904 Major intrinsic protein no 0.54
    5 Psyr_0367 formimidoylglutamate deiminase no 0.54
    6 Psyr_3874 amino acid ABC transporter substrate-binding protein, PAAT family 0.37 0.54
    7 Psyr_1021 Short-chain dehydrogenase/reductase SDR 0.19 0.53
    8 Psyr_4687 biotin synthase 0.28 0.52
    9 Psyr_3905 glycerol kinase no 0.52
    10 Psyr_0985 Protein of unknown function UPF0016 no 0.50
    11 Psyr_4519 General substrate transporter:Major facilitator superfamily no 0.49
    12 Psyr_0246 aminomethyltransferase no 0.49
    13 Psyr_0566 4Fe-4S cluster binding protein no 0.48
    14 Psyr_3776 Cytosine deaminase no 0.47
    15 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit no 0.47
    16 Psyr_3423 coproporphyrinogen III oxidase, anaerobic 0.30 0.47
    17 Psyr_0835 transcriptional regulator, TraR/DksA family no 0.47
    18 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.32 0.47
    19 Psyr_4091 8-oxo-dGTPase 0.36 0.46
    20 Psyr_4932 agmatine deiminase 0.55 0.46

    Or look for negative cofitness