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Gene
Fitness
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Cofit
Protein
Homologs
Top cofit genes for Psyr_4890 from
Pseudomonas syringae pv. syringae B728a
Peptidase S1, chymotrypsin
SEED: Trypsin domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_2218
Beta-lactamase-like protein
no
0.46
2
Psyr
_1162
conserved hypothetical protein
no
0.44
3
Psyr
_2222
aminomethyltransferase
no
0.43
4
Psyr
_0958
amine oxidase, flavin-containing
0.53
0.43
5
Psyr
_3521
transcriptional regulator, LysR family
no
0.41
6
Psyr
_1528
Arc-like DNA binding protein
no
0.41
7
Psyr
_2907
PpiC-type peptidyl-prolyl cis-trans isomerase
no
0.41
8
Psyr
_0756
indole-3-glycerol phosphate synthase
no
0.40
9
Psyr
_2719
transcriptional regulator, TetR family
no
0.40
10
Psyr
_2789
conserved hypothetical protein
no
0.40
11
Psyr
_1389
Protein of unknown function DUF1456
no
0.39
12
Psyr
_1615
Patatin
no
0.39
13
Psyr
_2281
GGDEF domain protein
no
0.39
14
Psyr
_1792
Amino acid adenylation
no
0.38
15
Psyr
_3828
Protein of unknown function DUF482
0.34
0.38
16
Psyr
_2822
hypothetical protein
no
0.38
17
Psyr
_4593
sigma factor domain protein
no
0.38
18
Psyr
_3975
conserved hypothetical protein
0.52
0.37
19
Psyr
_2836
hypothetical protein
no
0.37
20
Psyr
_2497
lipoprotein, putative
no
0.37
Or look for
negative cofitness