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  • Top cofit genes for Psyr_4882 from Pseudomonas syringae pv. syringae B728a

    protein translocase subunit secB
    SEED: Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)
    KEGG: preprotein translocase subunit SecB

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.62 0.70
    2 Psyr_4078 AmpG-related permease 0.63 0.67
    3 Psyr_4567 Protein of unknown function UPF0075 0.64 0.66
    4 Psyr_4623 Aminoglycoside phosphotransferase 0.63 0.65
    5 Psyr_0111 hypothetical protein no 0.64
    6 Psyr_0200 conserved hypothetical protein 0.74 0.64
    7 Psyr_3469 Glycosyl transferase, family 2 no 0.62
    8 Psyr_1681 Major facilitator superfamily no 0.62
    9 Psyr_3485 MCP methyltransferase, CheR-type no 0.61
    10 Psyr_4407 phosphoribosylamine--glycine ligase 0.78 0.61
    11 Psyr_2464 methionine synthase (B12-dependent) 0.69 0.61
    12 Psyr_3480 Flagellar basal-body rod protein FlgC 0.24 0.61
    13 Psyr_1668 amidophosphoribosyltransferase 0.77 0.60
    14 Psyr_3856 Helicase c2 no 0.59
    15 Psyr_2138 Glycosyl transferase, family 2 0.36 0.58
    16 Psyr_4678 GGDEF domain protein 0.73 0.58
    17 Psyr_1269 phosphoribosylformylglycinamidine synthase 0.87 0.58
    18 Psyr_4415 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase 0.55 0.58
    19 Psyr_0561 chemotaxis motA protein 0.76 0.58
    20 Psyr_5036 Response regulator receiver no 0.57

    Or look for negative cofitness