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  • Top cofit genes for Psyr_4757 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0200 conserved hypothetical protein no 0.53
    2 Psyr_3172 Glycosyl transferase, family 3 no 0.52
    3 Psyr_4377 response regulator receiver modulated diguanylate cyclase no 0.51
    4 Psyr_4846 L-threonine ammonia-lyase no 0.50
    5 Psyr_4632 Protein of unknown function DUF444 0.43 0.50
    6 Psyr_5036 Response regulator receiver 0.22 0.50
    7 Psyr_3448 Flagellar basal body-associated protein FliL 0.66 0.49
    8 Psyr_1682 arsenite efflux membrane protein ArsB 0.15 0.47
    9 Psyr_0783 MCP methyltransferase, CheR-type no 0.46
    10 Psyr_0561 chemotaxis motA protein 0.72 0.45
    11 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.77 0.45
    12 Psyr_3466 Flagellin, C-terminal:Flagellin, N-terminal no 0.45
    13 Psyr_3985 Pectate lyase/Amb allergen no 0.45
    14 Psyr_2302 FAD linked oxidase, N-terminal no 0.44
    15 Psyr_1684 GGDEF domain protein no 0.44
    16 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.37 0.43
    17 Psyr_4975 hypothetical protein no 0.43
    18 Psyr_2918 3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein no 0.43
    19 Psyr_3458 Flagellar hook-basal body complex protein FliE no 0.43
    20 Psyr_2730 outer membrane porin no 0.42

    Or look for negative cofitness