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  • Top cofit genes for Psyr_4678 from Pseudomonas syringae pv. syringae B728a

    GGDEF domain protein
    SEED: GGDEF domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3470 Flagellin, N-terminal no 0.78
    2 Psyr_3469 Glycosyl transferase, family 2 no 0.76
    3 Psyr_2138 Glycosyl transferase, family 2 no 0.75
    4 Psyr_3487 flagellar protein FlgA no 0.72
    5 Psyr_3447 Flagellar motor switch protein FliM no 0.71
    6 Psyr_3307 Glycosyl transferase, group 1 no 0.71
    7 Psyr_0561 chemotaxis motA protein 0.55 0.71
    8 Psyr_3301 Undecaprenyl-phosphate galactosephosphotransferase no 0.71
    9 Psyr_3304 Lipopolysaccharide biosynthesis no 0.71
    10 Psyr_3471 Flagellar basal body rod protein:Protein of unknown function DUF1078 no 0.71
    11 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE no 0.70
    12 Psyr_3435 chemotaxis phosphatase, CheZ no 0.69
    13 Psyr_3893 OmpA/MotB no 0.69
    14 Psyr_3308 Glycosyl transferase, group 1 no 0.68
    15 Psyr_1044 transcriptional regulator, LysR family 0.46 0.68
    16 Psyr_3441 Flagellar biosynthetic protein FlhB no 0.67
    17 Psyr_3485 MCP methyltransferase, CheR-type no 0.67
    18 Psyr_4078 AmpG-related permease 0.38 0.66
    19 Psyr_1684 GGDEF domain protein no 0.66
    20 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG no 0.66

    Or look for negative cofitness