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  • Top cofit genes for Psyr_4669 from Pseudomonas syringae pv. syringae B728a

    pyrroloquinoline quinone synthesis related protease (pqqF), Metallo peptidase, MEROPS family M16A
    SEED: Coenzyme PQQ synthesis protein F

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1104 Heme oxygenase no 0.40
    2 Psyr_0452 HylII 0.30 0.40
    3 Psyr_4659 type III effector HopAB1 no 0.39
    4 Psyr_2424 Integral membrane protein TerC no 0.39
    5 Psyr_4628 Protein of unknown function DUF525 0.30 0.39
    6 Psyr_0167 hypothetical protein no 0.39
    7 Psyr_3141 type II and III secretion system protein:NolW-like protein no 0.39
    8 Psyr_1881 conserved hypothetical protein no 0.38
    9 Psyr_1820 conserved hypothetical protein 0.44 0.38
    10 Psyr_3011 Helix-turn-helix, Fis-type no 0.38
    11 Psyr_0811 Integral membrane protein TerC no 0.37
    12 Psyr_3431 OmpA/MotB 0.52 0.37
    13 Psyr_3698 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt no 0.37
    14 Psyr_1169 nucleoside-binding protein no 0.36
    15 Psyr_0267 Endonuclease/exonuclease/phosphatase no 0.36
    16 Psyr_2616 Amino acid adenylation no 0.36
    17 Psyr_5038 phosphate ABC transporter ATP-binding protein, PhoT family 0.69 0.36
    18 Psyr_0809 stress protein no 0.36
    19 Psyr_3434 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt 0.37 0.36
    20 Psyr_4954 Protein of unknown function DUF877 no 0.36

    Or look for negative cofitness