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  • Top cofit genes for Psyr_4643 from Pseudomonas syringae pv. syringae B728a

    conjugal transfer protein
    SEED: Conjugative transfer protein TrbL
    KEGG: type IV secretion system protein VirB6

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3384 lipoprotein, putative no 0.53
    2 Psyr_2741 Beta-lactamase no 0.46
    3 Psyr_2748 FAD dependent oxidoreductase no 0.45
    4 Psyr_0628 Ethanolamine ammonia-lyase heavy chain no 0.45
    5 Psyr_4064 lipoprotein, putative no 0.43
    6 Psyr_1708 L-arabinonate dehydratase no 0.42
    7 Psyr_2331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:BFD-like [2Fe-2S]-binding region no 0.42
    8 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase no 0.41
    9 Psyr_1002 nucleoside ABC transporter ATP-binding protein no 0.41
    10 Psyr_2720 Urea amidolyase-related protein no 0.41
    11 Psyr_3716 Response regulator receiver:Transcriptional regulatory protein, C-terminal no 0.41
    12 Psyr_1725 Protein of unknown function DUF204 no 0.41
    13 Psyr_0696 selenophosphate synthase no 0.40
    14 Psyr_3525 3-hydroxyisobutyrate dehydrogenase no 0.40
    15 Psyr_3770 Propeptide, PepSY amd peptidase M4 no 0.40
    16 Psyr_0838 Rieske [2Fe-2S] region no 0.40
    17 Psyr_1729 transcriptional regulator, MarR family no 0.39
    18 Psyr_4174 conserved hypothetical protein no 0.39
    19 Psyr_5118 transcriptional regulator, DeoR family no 0.39
    20 Psyr_1937 UspA no 0.38

    Or look for negative cofitness