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  • Top cofit genes for Psyr_4502 from Pseudomonas syringae pv. syringae B728a

    carbohydrate ABC transporter substrate-binding protein, CUT1 family
    SEED: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
    KEGG: sn-glycerol 3-phosphate transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4522 Catalase no 0.47
    2 Psyr_4602 hypothetical protein no 0.37
    3 Psyr_1302 Leucine-rich repeat protein no 0.37
    4 Psyr_1676 1-aminocyclopropane-1-carboxylate deaminase, putative no 0.37
    5 Psyr_2414 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 no 0.35
    6 Psyr_2636 TspO/MBR-related protein 0.24 0.35
    7 Psyr_0872 Alkaline phosphatase no 0.35
    8 Psyr_5052 Sodium:alanine symporter 0.90 0.34
    9 Psyr_5000 conserved hypothetical protein no 0.34
    10 Psyr_5051 Aspartate ammonia-lyase 0.27 0.34
    11 Psyr_4572 Short-chain dehydrogenase/reductase SDR 0.21 0.33
    12 Psyr_4503 carbohydrate ABC transporter membrane protein 1, CUT1 family 0.94 0.33
    13 Psyr_1682 arsenite efflux membrane protein ArsB 0.65 0.33
    14 Psyr_4521 Bacterioferritin no 0.32
    15 Psyr_2686 carbamate kinase no 0.32
    16 Psyr_3195 NolW-like protein no 0.32
    17 Psyr_4505 carbohydrate ABC transporter ATP-binding protein, CUT1 family no 0.32
    18 Psyr_2635 conserved hypothetical protein no 0.32
    19 Psyr_4600 Glycoside hydrolase, family 5 no 0.31
    20 Psyr_3298 conserved hypothetical protein no 0.31

    Or look for negative cofitness