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  • Top cofit genes for Psyr_4479 from Pseudomonas syringae pv. syringae B728a

    5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
    SEED: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3380 Secretion protein HlyD no 0.27
    2 Psyr_0766 Protein of unknown function DUF1440 no 0.26
    3 Psyr_4727 glutathione S-transferase, putative no 0.25
    4 Psyr_4693 Binding-protein-dependent transport systems inner membrane component no 0.25
    5 Psyr_3123 type III effector HopAH2 no 0.24
    6 Psyr_3087 transcriptional regulator, GntR family 0.20 0.24
    7 Psyr_3268 myo-inositol 2-dehydrogenase no 0.24
    8 Psyr_3519 hypothetical protein no 0.23
    9 Psyr_3028 Protein of unknown function DUF28 0.28 0.23
    10 Psyr_3537 hydrolase no 0.23
    11 Psyr_3788 Conserved hypothetical protein 2001 no 0.23
    12 Psyr_2290 TonB-dependent receptor:TonB-dependent receptor no 0.23
    13 Psyr_1881 conserved hypothetical protein no 0.23
    14 Psyr_0972 conserved hypothetical protein no 0.23
    15 Psyr_2986 Glycoside hydrolase, family 15 0.36 0.23
    16 Psyr_2257 Amidohydrolase no 0.23
    17 Psyr_0617 conserved hypothetical protein no 0.22
    18 Psyr_3229 Glycosyl transferase, group 1 no 0.22
    19 Psyr_4812 sorbitol-binding protein / mannitol-binding protein no 0.22
    20 Psyr_3542 Short-chain dehydrogenase/reductase SDR no 0.22

    Or look for negative cofitness