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  • Top cofit genes for Psyr_4404 from Pseudomonas syringae pv. syringae B728a

    tRNA-U20-dihydrouridine synthase
    SEED: tRNA dihydrouridine synthase B (EC 1.-.-.-)
    KEGG: tRNA-dihydrouridine synthase B

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2788 hypothetical protein no 0.46
    2 Psyr_0966 Conserved hypothetical protein YfcH 0.41 0.46
    3 Psyr_2762 Peptidase S24, S26A and S26B no 0.45
    4 Psyr_2827 phage-related protein no 0.45
    5 Psyr_4403 conserved hypothetical protein 0.48 0.44
    6 Psyr_2774 Bacteriophage lambda tail assembly I 0.44 0.42
    7 Psyr_1589 conserved hypothetical protein no 0.41
    8 Psyr_4848 SdiA-regulated no 0.41
    9 Psyr_3003 [Acyl-carrier protein] phosphodiesterase 0.55 0.41
    10 Psyr_4275 DNA replication and repair protein RadA 0.71 0.40
    11 Psyr_2312 Protein of unknown function DUF24 no 0.40
    12 Psyr_2780 Phage tail tape measure protein lambda no 0.40
    13 Psyr_3333 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 0.74 0.39
    14 Psyr_0477 Protein of unknown function UPF0001 0.91 0.39
    15 Psyr_2806 Bacteriophage Lambda NinG no 0.39
    16 Psyr_3299 two component transcriptional regulator, LuxR family 0.27 0.39
    17 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase no 0.39
    18 Psyr_2761 DNA-directed DNA polymerase no 0.39
    19 Psyr_3977 Urea amidolyase-related protein no 0.39
    20 Psyr_4239 Binding-protein-dependent transport systems inner membrane component 0.56 0.38

    Or look for negative cofitness