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  • Top cofit genes for Psyr_4395 from Pseudomonas syringae pv. syringae B728a

    type II secretion system protein
    SEED: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
    KEGG: tight adherence protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2869 xenobiotic compound monooxygenase, DszA family no 0.44
    2 Psyr_4025 ATPase no 0.39
    3 Psyr_5082 Band 7 protein no 0.39
    4 Psyr_1789 chemotaxis sensory transducer no 0.38
    5 Psyr_2556 dCTP deaminase no 0.36
    6 Psyr_1792 Amino acid adenylation no 0.36
    7 Psyr_4051 transcriptional regulator, ArsR family 0.42 0.35
    8 Psyr_2499 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal no 0.35
    9 Psyr_3986 GCN5-related N-acetyltransferase no 0.34
    10 Psyr_1435 transcriptional regulator, LysR family no 0.33
    11 Psyr_5080 Cyclopropane-fatty-acyl-phospholipid synthase no 0.33
    12 Psyr_0893 hypothetical protein no 0.33
    13 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 0.17 0.33
    14 Psyr_2715 Major facilitator superfamily no 0.32
    15 Psyr_3087 transcriptional regulator, GntR family 0.27 0.32
    16 Psyr_0723 Sensor protein PilS no 0.32
    17 Psyr_1124 conserved hypothetical protein no 0.32
    18 Psyr_1822 MscS Mechanosensitive ion channel no 0.31
    19 Psyr_1761 Hydroxyacylglutathione hydrolase no 0.31
    20 Psyr_3054 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase no 0.31

    Or look for negative cofitness