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  • Top cofit genes for Psyr_4375 from Pseudomonas syringae pv. syringae B728a

    Peptidase A24A, prepilin type IV
    SEED: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
    KEGG: prepilin peptidase CpaA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3052 Na+/solute symporter 0.42 0.31
    2 Psyr_4805 YD repeat protein no 0.30
    3 Psyr_2914 ATP-dependent DNA helicase RecQ no 0.30
    4 Psyr_2518 conserved hypothetical protein no 0.29
    5 Psyr_5110 SdiA-regulated no 0.28
    6 Psyr_3040 conserved hypothetical protein 0.43 0.28
    7 Psyr_0418 conserved domain protein no 0.28
    8 Psyr_2941 amino acid ABC transporter substrate-binding protein, PAAT family no 0.28
    9 Psyr_3538 transcriptional regulator, TetR family no 0.27
    10 Psyr_0792 conserved hypothetical protein no 0.27
    11 Psyr_1050 conserved hypothetical protein no 0.27
    12 Psyr_2371 L-arabinose-binding protein no 0.27
    13 Psyr_4314 Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein no 0.26
    14 Psyr_0491 chemotaxis sensory transducer no 0.26
    15 Psyr_0797 type II secretion system protein no 0.26
    16 Psyr_3728 hypothetical protein no 0.26
    17 Psyr_2738 regulatory protein, LysR no 0.26
    18 Psyr_4957 Protein of unknown function DUF1305 no 0.26
    19 Psyr_1970 Secretion protein HlyD no 0.26
    20 Psyr_4806 hypothetical protein no 0.26

    Or look for negative cofitness