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Cofit
Protein
Homologs
Top cofit genes for Psyr_4373 from
Pseudomonas syringae pv. syringae B728a
PAS
SEED: Sensory box histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3455
Flagellar assembly protein FliH
0.64
0.46
2
Psyr
_4394
type II secretion system protein
0.52
0.39
3
Psyr
_3442
Flagellar biosynthesis protein FliR
0.40
0.38
4
Psyr
_1374
RNA polymerase, sigma 38 subunit, RpoS
0.46
0.37
5
Psyr
_3457
Flagellar FliF M-ring protein
0.49
0.37
6
Psyr
_3440
Flagellar biosynthesis protein FlhA
0.51
0.37
7
Psyr
_1509
PilM protein, putative
no
0.36
8
Psyr
_2259
Beta-lactamase-like protein
no
0.36
9
Psyr
_3454
ATPase FliI/YscN
0.57
0.35
10
Psyr
_3802
conserved hypothetical protein
no
0.35
11
Psyr
_3461
Helix-turn-helix, Fis-type
0.62
0.35
12
Psyr
_3443
Flagellar biosynthesis protein FliQ
0.57
0.34
13
Psyr
_3866
conserved hypothetical protein
no
0.34
14
Psyr
_3437
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
0.66
0.34
15
Psyr
_5035
Peptidase M23B
no
0.34
16
Psyr
_1968
RND efflux system, outer membrane lipoprotein, NodT
0.26
0.34
17
Psyr
_3456
Flagellar motor switch protein FliG
0.56
0.33
18
Psyr
_3462
conserved hypothetical protein
0.20
0.33
19
Psyr
_4339
ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase
0.52
0.33
20
Psyr
_4621
Heat shock protein DnaJ, N-terminal
no
0.33
Or look for
negative cofitness