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  • Top cofit genes for Psyr_4373 from Pseudomonas syringae pv. syringae B728a

    PAS
    SEED: Sensory box histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3455 Flagellar assembly protein FliH 0.64 0.46
    2 Psyr_4394 type II secretion system protein 0.52 0.39
    3 Psyr_3442 Flagellar biosynthesis protein FliR 0.40 0.38
    4 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS 0.46 0.37
    5 Psyr_3457 Flagellar FliF M-ring protein 0.49 0.37
    6 Psyr_3440 Flagellar biosynthesis protein FlhA 0.51 0.37
    7 Psyr_1509 PilM protein, putative no 0.36
    8 Psyr_2259 Beta-lactamase-like protein no 0.36
    9 Psyr_3454 ATPase FliI/YscN 0.57 0.35
    10 Psyr_3802 conserved hypothetical protein no 0.35
    11 Psyr_3461 Helix-turn-helix, Fis-type 0.62 0.35
    12 Psyr_3443 Flagellar biosynthesis protein FliQ 0.57 0.34
    13 Psyr_3866 conserved hypothetical protein no 0.34
    14 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.66 0.34
    15 Psyr_5035 Peptidase M23B no 0.34
    16 Psyr_1968 RND efflux system, outer membrane lipoprotein, NodT 0.51 0.34
    17 Psyr_3456 Flagellar motor switch protein FliG 0.56 0.33
    18 Psyr_3462 conserved hypothetical protein 0.49 0.33
    19 Psyr_4339 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase 0.53 0.33
    20 Psyr_4621 Heat shock protein DnaJ, N-terminal 0.41 0.33

    Or look for negative cofitness