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  • Top cofit genes for Psyr_4297 from Pseudomonas syringae pv. syringae B728a

    Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
    SEED: ATP-dependent RNA helicase PA3950

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3482 Protein of unknown function DUF1348 no 0.41
    2 Psyr_0758 beta-fructofuranosidase no 0.38
    3 Psyr_4242 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.17 0.38
    4 Psyr_1200 outer-membrane type III secretion protein HrcC no 0.38
    5 Psyr_1401 Histidine triad (HIT) protein 0.40 0.37
    6 Psyr_0784 CheW-like protein 0.23 0.37
    7 Psyr_1614 lipid A biosynthesis acyltransferase 0.37 0.37
    8 Psyr_0015 Oxidoreductase alpha (molybdopterin) subunit no 0.36
    9 Psyr_4499 TonB-dependent siderophore receptor no 0.36
    10 Psyr_1720 Protein of unknown function DUF58 0.23 0.35
    11 Psyr_1721 moxR protein, putative 0.24 0.35
    12 Psyr_0033 tryptophan synthase, alpha chain 0.17 0.35
    13 Psyr_4383 esterase/lipase/thioesterase family protein no 0.35
    14 Psyr_4610 phosphoglycolate phosphatase 0.14 0.35
    15 Psyr_3023 conserved hypothetical protein no 0.35
    16 Psyr_1422 Protein of unknown function DUF1528:Relaxase no 0.34
    17 Psyr_1210 type III secretion protein HrcQa no 0.34
    18 Psyr_3269 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase no 0.34
    19 Psyr_4501 transcriptional regulator, MarR family no 0.34
    20 Psyr_2169 transcriptional regulator, MerR family 0.43 0.34

    Or look for negative cofitness